Gerry Tonkin-Hill
Up to date code and documentation for my software can be found on GitHub.
Software
panaroo
An error aware pipeline for pangenome investigation
fastbaps
A fast approximation to a Dirichlet Process Mixture model (DPM) for clustering genetic data
pairsnp
A set of scripts for very quickly obtaining pairwise SNP distance matrices from multiple sequence alignments using sparse matrix libraries to improve performance.
rhierbaps
R package implementing the hierBAPS algorithm.
starmie
R package developed with Stuart Lee to make post processing of population structure software output easier.